public class GeneralGlyph extends GraphicalObject
Constructor and Description |
---|
GeneralGlyph()   |
GeneralGlyph(GeneralGlyph source)   |
GeneralGlyph(LayoutPkgNamespaces layoutns)   |
GeneralGlyph(LayoutPkgNamespaces layoutns,
String id)   |
GeneralGlyph(LayoutPkgNamespaces layoutns,
String id,
String referenceId)   |
GeneralGlyph(long level)   |
GeneralGlyph(long level,
long version)   |
GeneralGlyph(long level,
long version,
long pkgVersion)   |
GeneralGlyph(XMLNode node)   |
GeneralGlyph(XMLNode node,
long l2version)   |
getBoundingBox, getMetaIdRef, isSetMetaIdRef, setBoundingBox, setMetaIdRef, unsetId, unsetMetaIdRef
addCVTerm, addCVTerm, appendAnnotation, appendAnnotation, appendNotes, appendNotes, disablePackage, enablePackage, equals, getAncestorOfType, getAncestorOfType, getAnnotation, getAnnotationString, getColumn, getCVTerm, getCVTerms, getElementByMetaId, getElementBySId, getLevel, getLine, getListOfAllElements, getListOfAllElementsFromPlugins, getMetaId, getModel, getModelHistory, getNamespaces, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getPackageName, getPackageVersion, getParentSBMLObject, getPlugin, getPlugin, getResourceBiologicalQualifier, getResourceModelQualifier, getSBMLDocument, getSBOTerm, getSBOTermAsURL, getSBOTermID, getVersion, hashCode, hasValidLevelVersionNamespaceCombination, isPackageEnabled, isPackageURIEnabled, isSetAnnotation, isSetMetaId, isSetModelHistory, isSetNotes, isSetSBOTerm, matchesRequiredSBMLNamespacesForAddition, matchesSBMLNamespaces, removeFromParentAndDelete, removeTopLevelAnnotationElement, removeTopLevelAnnotationElement, renameMetaIdRefs, renameSIdRefs, renameUnitSIdRefs, replaceTopLevelAnnotationElement, replaceTopLevelAnnotationElement, setAnnotation, setAnnotation, setMetaId, setModelHistory, setNamespaces, setNotes, setNotes, setNotes, setSBOTerm, setSBOTerm, toSBML, unsetAnnotation, unsetCVTerms, unsetMetaId, unsetModelHistory, unsetName, unsetNotes, unsetSBOTerm
public GeneralGlyph() throws SBMLConstructorException
SBMLConstructorException
public GeneralGlyph(GeneralGlyph source) throws SBMLConstructorException
SBMLConstructorException
public GeneralGlyph(LayoutPkgNamespaces layoutns) throws SBMLConstructorException
SBMLConstructorException
public GeneralGlyph(LayoutPkgNamespaces layoutns, String id) throws SBMLConstructorException
SBMLConstructorException
public GeneralGlyph(LayoutPkgNamespaces layoutns, String id, String referenceId) throws SBMLConstructorException
SBMLConstructorException
public GeneralGlyph(long level) throws SBMLConstructorException
SBMLConstructorException
public GeneralGlyph(long level, long version) throws SBMLConstructorException
SBMLConstructorException
public GeneralGlyph(long level, long version, long pkgVersion) throws SBMLConstructorException
SBMLConstructorException
public GeneralGlyph(XMLNode node) throws SBMLConstructorException
SBMLConstructorException
public GeneralGlyph(XMLNode node, long l2version) throws SBMLConstructorException
SBMLConstructorException
public void addReferenceGlyph(ReferenceGlyph glyph)
public void addSubGlyph(GraphicalObject glyph)
public GeneralGlyph cloneObject()
SBase
object.
cloneObject
 in class GraphicalObject
SBase
object.public CubicBezier createCubicBezier()
public LineSegment createLineSegment()
public ReferenceGlyph createReferenceGlyph()
public void delete()
In general, application software will not need to call this method directly. The Java language binding for libSBML is implemented as a language wrapper that provides a Java interface to libSBML's underlying C++/C code. Some of the Java methods return objects that are linked to objects created not by Java code, but by C++ code. The Java objects wrapped around them will be deleted when the garbage collector invokes the corresponding C++ finalize()
methods for the objects. The finalize()
methods in turn call the GeneralGlyph.delete()
method on the libSBML object.
This method is exposed in case calling programs want to ensure that the underlying object is freed immediately, and not at some arbitrary time determined by the Java garbage collector. In normal usage, callers do not need to invoke GeneralGlyph.delete()
themselves.
delete
 in class GraphicalObject
public String getElementName()
This is overridden by subclasses to return a string appropriate to the
SBML component. For example, Model
defines it as returning
'model'
, CompartmentType
defines it as returning 'compartmentType'
,
and so on.
getElementName
 in class GraphicalObject
public long getIndexForReferenceGlyph(String id)
public long getIndexForSubGlyph(String id)
public ListOfReferenceGlyphs getListOfReferenceGlyphs()
public ListOfGraphicalObjects getListOfSubGlyphs()
public long getNumReferenceGlyphs()
public long getNumSubGlyphs()
public ReferenceGlyph getReferenceGlyph(long index)
public String getReferenceId()
public GraphicalObject getSubGlyph(long index)
public int getTypeCode()
This method may return the type code of this SBML object, or it may
return SBML_UNKNOWN
. This
is because subclasses of SBase
are not required to implement this
method to return a type code. This method is meant primarily for the
LibSBML C interface, in which class and subclass information is not
readily available.
getTypeCode
 in class GraphicalObject
SBML_UNKNOWN
(the default).
GeneralGlyph.getElementName()
,
SBase.getPackageName()
public void initDefaults()
initDefaults
 in class GraphicalObject
public boolean isSetCurve()
public boolean isSetReferenceId()
public ReferenceGlyph removeReferenceGlyph(long index)
public ReferenceGlyph removeReferenceGlyph(String id)
public GraphicalObject removeSubGlyph(long index)
public GraphicalObject removeSubGlyph(String id)
public int setReferenceId(String id)
public XMLNode toXML()
toXML
 in class GraphicalObject